ppvcf
1.0.0
Library for the parallel parsing of VCF files
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This is the complete list of members for Variant, including all inherited members.
add_genotype(const uint8_t a1, const uint8_t a2, const bool phased) | Variant | inline |
alts | Variant | private |
filter | Variant | private |
genotypes | Variant | private |
get_alt(const int i) const | Variant | inline |
get_alts() const | Variant | inline |
get_idx() const | Variant | inline |
get_info(const string &k) const | Variant | inline |
get_pos() const | Variant | inline |
get_quality() const | Variant | inline |
get_ref() const | Variant | inline |
get_seqname() const | Variant | inline |
gti | Variant | private |
idx | Variant | private |
info | Variant | private |
nsamples | Variant | private |
pos | Variant | private |
quality | Variant | private |
ref | Variant | private |
seq_name | Variant | private |
store_filter(bcf_hdr_t *header, bcf1_t *record) | Variant | inlineprivate |
store_info(bcf_hdr_t *header, bcf1_t *record) | Variant | inlineprivate |
update_till_info(bcf_hdr_t *header, bcf1_t *record) | Variant | inline |
Variant(const uint32_t _nsamples) | Variant | inline |
~Variant() | Variant | inline |